Neuroimaging resources
Neuroimaging video series
Either on youtube or on some other platform
Neurohackademy Lectures
Lecture series on neuroimaging and electrophysiology from the Neurohackademy summer school.
Mike Cohen's Lectures on Time Series Analysis
Mike Cohen's lecturelets on time series data analysis here.
Mumford brainstats
Jeanette Mumford series of videos on neuroimaging analysis on youtube. The channel also has Facebook group.
Andrew Jahn
Here for the videos with 'tutorials' for FSL, SPM, Freesurfer and AFNI amongst other things.
Exploring the Human Connectome 2019
HCP 2019 course lecture slides can be found here
Center for Brains, Minds and Machines
Organization from human brain mapping (OHBM)
The videos of the lectures and workshops from the previous HBM conferences are available online here.
fMRIf summer courses from the NIH
Conference on Cognitive Computational Neuroscience (CCN)
This conference has the videos from its first edition here
INCF
TVB made easy
Lectures showing how to use The Virtual Brain software in a clinical context can be found here
Computational and Systems Neuroscience (Cosyne) 2018
Cambridge University MRC Cognition and Brain Sciences Unit Method Seminars 2017
Cambridge University MRC Cognition and Brain Sciences Unit Method Seminars 2018
ISMRM Educational Materials
fMRIF NIMH fMRI Course - from 2014 to 2018
Rad229: MRI Signals and Sequences – Stanford University 2020 course
The above list is by far not exhaustive, you will be able to find more resources in the following:
- the Neuroimaging Informatics Tools and Resources Clearinghouse
- Mariam Aly's lab wiki
- Jonathan Peelle's list of resources for beignners
- Stephan Heunis has a list to many SPM and matlab material.
- https://github.com/brainhack101 also has a collections or links to courses, data...
- a list of Scientific Coding Resource put together by neuroconscience.
- Aya Ben-Yakov compiled a great list of open-science resources for the CBU in Cambridge.
- LabHacks is a list of resources for data driven neuroscientists put together by Patrick Beukema
- a list of open computational neuroscience resources put together by Austin Soplata
- a list of Computational resources put together by Martina Vilas
Interactive Brain Atlases
Analysis
- Advanced time-series analysis (Dynamic Mode Decomposition) by Bing Brunton within Neurohackweek 2017 (1 hr 1 min)
- Advanced time-series analysis by Bing Brunton within Neurohackweek 2016 (1 hr 8 min)
- Data visualization by Tal Yarkoni within Neurohackademy 2018
- Efficiency and Design Optimization for fMRI by Jeanette Mumford within Neurohackweek 2017 (51 min)
- Image processing by Ariel Rokem within Neurohackweek 2016
- Modeling fMRI data by Kendrick Kay within Neurohackweek 2016 (1 hr 2 min)
- NiBabel 101 by Dan Lurie within Brainhack Americas (18 min)
- Numerical computing for neuroimaging by JB Poline within Neurohackademy 2018
- R for statistical analysis of fMRI data by Tara Madhyastha within Neurohackademy 2018 (1 hr 26 min)
- A video series on dynamic causal modeling by Kevin Aquino [6 hrs]
- A blog post tutorial on active inference (to get a better grasp on what free energy is)
Brainhack
- Brainhacking by Cameron Craddock within Neurohackademy 2018 (59 min)
- Craddock, R. C., Margulies, D. S., Bellec, P., Nichols, B. N., Alcauter, S., Barrios, F. A., … Xu, T. (2016). Brainhack: a collaborative workshop for the open neuroscience community. GigaScience, 5(1).
- Introduction to Brainhack by Cameron Craddock within Brainhack Proceedings 2017 (30 min)
- Introduction to Neurohackweek 2017 by Ariel Rokem within Neurohackweek 2017